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Results: 18
Number of items: 18
  • Open Access
    Vijaykumar, A., ten Wolde, P. R., & Bolhuis, P. G. (2018). Generalised expressions for the association and dissociation rate constants of molecules with multiple binding sites. Molecular Physics, 116(21-22), 3042-3054. https://doi.org/10.1080/00268976.2018.1473653
  • Open Access
    Vijaykumar, A., ten Wolde, P. R., & Bolhuis, P. G. (2018). Rate constants for proteins binding to substrates with multiple binding sites using a generalized forward flux sampling expression. Journal of Chemical Physics, 148(12), Article 124109. https://doi.org/10.1063/1.5012854
  • Open Access
    Vijaykumar, A., Ouldridge, T. E., ten Wolde, P. R., & Bolhuis, P. G. (2017). Multiscale simulations of anisotropic particles combining molecular dynamics and Green's function reaction dynamics. Journal of Chemical Physics, 146(11), Article 114106. https://doi.org/10.1063/1.4977515
  • Open Access
    Vijaykumar, A. (2017). Multi-scale simulation of reaction-diffusion systems. [Thesis, fully internal, Universiteit van Amsterdam].
  • Open Access
    Vijaykumar, A., ten Wolde, P. R., & Bolhuis, P. G. (2017). The magnitude of the intrinsic rate constant: How deep can association reactions be in the diffusion limited regime? Journal of Chemical Physics, 147(18), Article 184108. https://doi.org/10.1063/1.5009547
  • Valeriani, C., Allen, R. J., Morelli, M. J., Frenkel, D., & ten Wolde, P. R. (2009). Computing stationary distributions in equilibrium and non-equilibrium systems with Forward Flux Sampling. Van 't Hoff Institute for Molecular Sciences. http://arxiv.org/abs/0907.0581
  • Valeriani, C., Allen, R. J., Morelli, M. J., Frenkel, D., & ten Wolde, P. R. (2007). Computing stationary distributions in equilibrium and nonequilibrium systems with forward flux sampling. Journal of Chemical Physics, 127(11), 114109/1-114109/11.
  • Open Access
    Morelli, M. J. (2007). Fluctuations in genetic networks : a computational study. [Thesis, externally prepared, Universiteit van Amsterdam].
  • Allen, R. J., Frenkel, D., & ten Wolde, P. R. (2006). Simulating rare events in equilibrium or nonequilibrium stochastic systems. Journal of Chemical Physics, 124(2), 024102/1-024102/16.
  • Allen, R. J., Frenkel, D., & ten Wolde, P. R. (2006). Forward flux sampling-type schemes for simulating rare events: Efficiency analysis. Journal of Chemical Physics, 124(19), 194111/1-194111/17.
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